Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Gm15240-201ENSMUST00000118156 720 ntBASIC14.79□□□□□ -0.04
PrnpP04925 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.79□□□□□ -0.04
PrnpP04925 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.79□□□□□ -0.04
PrnpP04925 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.79□□□□□ -0.04
PrnpP04925 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.79□□□□□ -0.04
PrnpP04925 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.79□□□□□ -0.04
PrnpP04925 Gm9899-201ENSMUST00000065519 555 ntBASIC14.79□□□□□ -0.04
PrnpP04925 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PrnpP04925 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PrnpP04925 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PrnpP04925 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrnpP04925 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.78□□□□□ -0.04
PrnpP04925 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PrnpP04925 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PrnpP04925 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Mir1894-201ENSMUST00000122802 81 ntBASIC14.78□□□□□ -0.04
PrnpP04925 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.78□□□□□ -0.04
PrnpP04925 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.78□□□□□ -0.04
PrnpP04925 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.78□□□□□ -0.04
PrnpP04925 AY702102-202ENSMUST00000194651 1173 ntBASIC14.78□□□□□ -0.04
PrnpP04925 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.78□□□□□ -0.04
PrnpP04925 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.78□□□□□ -0.04
PrnpP04925 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PrnpP04925 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.78□□□□□ -0.04
PrnpP04925 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PrnpP04925 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrnpP04925 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.77□□□□□ -0.04
PrnpP04925 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PrnpP04925 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PrnpP04925 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PrnpP04925 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrnpP04925 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PrnpP04925 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.77□□□□□ -0.05
PrnpP04925 Gm11425-201ENSMUST00000119608 498 ntBASIC14.77□□□□□ -0.05
PrnpP04925 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Mir1938-201ENSMUST00000158746 100 ntBASIC14.77□□□□□ -0.05
PrnpP04925 Gm6244-201ENSMUST00000178732 841 ntBASIC14.77□□□□□ -0.05
PrnpP04925 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.77□□□□□ -0.05
PrnpP04925 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.77□□□□□ -0.05
PrnpP04925 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.77□□□□□ -0.05
PrnpP04925 Gm9396-201ENSMUST00000076703 567 ntBASIC14.77□□□□□ -0.05
PrnpP04925 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PrnpP04925 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PrnpP04925 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms