Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm13823-201ENSMUST00000119930 345 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm17837-201ENSMUST00000186435 985 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm2451-201ENSMUST00000199447 999 ntBASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm10290-201ENSMUST00000200451 999 ntBASIC12.03□□□□□ -0.48
Hoxa3P02831 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm6888-201ENSMUST00000221983 706 ntBASIC12.03□□□□□ -0.48
Hoxa3P02831 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa3P02831 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.03□□□□□ -0.48
Hoxa3P02831 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa3P02831 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.02□□□□□ -0.48
Hoxa3P02831 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa3P02831 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Hoxa3P02831 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa3P02831 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa3P02831 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa3P02831 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa3P02831 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxa3P02831 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa3P02831 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxa3P02831 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxa3P02831 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa3P02831 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa3P02831 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms