Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.08□□□□□ -0.8
Hbb-b1P02088 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.08□□□□□ -0.8
Hbb-b1P02088 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.08□□□□□ -0.8
Hbb-b1P02088 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.08□□□□□ -0.8
Hbb-b1P02088 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.08□□□□□ -0.8
Hbb-b1P02088 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hbb-b1P02088 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.07□□□□□ -0.8
Hbb-b1P02088 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hbb-b1P02088 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.07□□□□□ -0.8
Hbb-b1P02088 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.07□□□□□ -0.8
Hbb-b1P02088 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Hbb-b1P02088 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gm8318-201ENSMUST00000182954 872 ntBASIC10.07□□□□□ -0.8
Hbb-b1P02088 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.07□□□□□ -0.8
Hbb-b1P02088 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.07□□□□□ -0.8
Hbb-b1P02088 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hbb-b1P02088 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hbb-b1P02088 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms