Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col5a1O88207 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col5a1O88207 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.75□□□□□ -0.37
Col5a1O88207 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Col5a1O88207 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col5a1O88207 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col5a1O88207 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col5a1O88207 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Col5a1O88207 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm15808-201ENSMUST00000119046 604 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm27772-201ENSMUST00000184900 187 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm18753-201ENSMUST00000201000 566 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 Gm3961-201ENSMUST00000204425 994 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.74□□□□□ -0.37
Col5a1O88207 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.74□□□□□ -0.37
Col5a1O88207 Gm6983-201ENSMUST00000214912 628 ntBASIC12.74□□□□□ -0.37
Col5a1O88207 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Col5a1O88207 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col5a1O88207 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.73□□□□□ -0.37
Col5a1O88207 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.73□□□□□ -0.37
Col5a1O88207 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.73□□□□□ -0.37
Col5a1O88207 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Gm13385-201ENSMUST00000121089 220 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.73□□□□□ -0.37
Col5a1O88207 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.73□□□□□ -0.37
Col5a1O88207 Gm19184-201ENSMUST00000196798 928 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Gm43758-201ENSMUST00000199500 367 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 Gm7287-201ENSMUST00000205267 602 ntBASIC12.73□□□□□ -0.37
Col5a1O88207 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.73□□□□□ -0.37
Col5a1O88207 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.73□□□□□ -0.37
Col5a1O88207 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col5a1O88207 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms