Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.16□□□□□ -0.14
Pdlim1O70400 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.16□□□□□ -0.14
Pdlim1O70400 Gm16476-201ENSMUST00000221544 139 ntBASIC14.16□□□□□ -0.14
Pdlim1O70400 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Pdlim1O70400 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim1O70400 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Gm15653-201ENSMUST00000119247 907 ntBASIC14.15□□□□□ -0.14
Pdlim1O70400 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.15□□□□□ -0.14
Pdlim1O70400 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim1O70400 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.15□□□□□ -0.14
Pdlim1O70400 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pdlim1O70400 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Pdlim1O70400 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pdlim1O70400 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pdlim1O70400 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.14□□□□□ -0.15
Pdlim1O70400 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pdlim1O70400 Gm27533-201ENSMUST00000183800 152 ntBASIC14.14□□□□□ -0.15
Pdlim1O70400 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Dupd1-202ENSMUST00000224735 548 ntBASIC14.14□□□□□ -0.15
Pdlim1O70400 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pdlim1O70400 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Mir125a-201ENSMUST00000083545 68 ntBASIC14.14□□□□□ -0.15
Pdlim1O70400 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
Pdlim1O70400 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pdlim1O70400 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms