Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.3□□□□□ -0.6
Pde6dO55057 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pde6dO55057 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.3□□□□□ -0.6
Pde6dO55057 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.3□□□□□ -0.6
Pde6dO55057 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.3□□□□□ -0.6
Pde6dO55057 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.3□□□□□ -0.6
Pde6dO55057 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Pde6dO55057 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.3□□□□□ -0.6
Pde6dO55057 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pde6dO55057 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Pde6dO55057 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.3□□□□□ -0.6
Pde6dO55057 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.29□□□□□ -0.6
Pde6dO55057 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pde6dO55057 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Gm45328-201ENSMUST00000210942 917 ntBASIC11.29□□□□□ -0.6
Pde6dO55057 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pde6dO55057 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.29□□□□□ -0.6
Pde6dO55057 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pde6dO55057 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pde6dO55057 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pde6dO55057 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Gm4459-201ENSMUST00000118750 468 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Gm10653-202ENSMUST00000139570 835 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pde6dO55057 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Pde6dO55057 Gm7889-201ENSMUST00000185591 958 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pde6dO55057 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.28□□□□□ -0.6
Pde6dO55057 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.28□□□□□ -0.6
Pde6dO55057 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pde6dO55057 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms