Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NlkO54949 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NlkO54949 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NlkO54949 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NlkO54949 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NlkO54949 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NlkO54949 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NlkO54949 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.84□□□□□ -0.35
NlkO54949 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
NlkO54949 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Gm8318-201ENSMUST00000182954 872 ntBASIC12.84□□□□□ -0.35
NlkO54949 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.84□□□□□ -0.35
NlkO54949 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NlkO54949 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.84□□□□□ -0.35
NlkO54949 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
NlkO54949 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NlkO54949 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NlkO54949 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NlkO54949 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NlkO54949 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NlkO54949 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.83□□□□□ -0.35
NlkO54949 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.83□□□□□ -0.35
NlkO54949 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.83□□□□□ -0.36
NlkO54949 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.83□□□□□ -0.36
NlkO54949 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.83□□□□□ -0.36
NlkO54949 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.83□□□□□ -0.36
NlkO54949 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NlkO54949 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NlkO54949 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.82□□□□□ -0.36
NlkO54949 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NlkO54949 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
NlkO54949 Gm18489-201ENSMUST00000172565 551 ntBASIC12.82□□□□□ -0.36
NlkO54949 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms