Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Smarce1O54941 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Smarce1O54941 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarce1O54941 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarce1O54941 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.06■□□□□ 0.32
Smarce1O54941 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.06■□□□□ 0.32
Smarce1O54941 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Smarce1O54941 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarce1O54941 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarce1O54941 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarce1O54941 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Gm8584-201ENSMUST00000171982 758 ntBASIC17.05■□□□□ 0.32
Smarce1O54941 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.05■□□□□ 0.32
Smarce1O54941 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Smarce1O54941 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Smarce1O54941 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smarce1O54941 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smarce1O54941 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Smarce1O54941 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarce1O54941 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smarce1O54941 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Gm2651-201ENSMUST00000203560 838 ntBASIC17.04■□□□□ 0.32
Smarce1O54941 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarce1O54941 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarce1O54941 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.03■□□□□ 0.32
Smarce1O54941 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.03■□□□□ 0.32
Smarce1O54941 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Smarce1O54941 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarce1O54941 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarce1O54941 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.03■□□□□ 0.32
Smarce1O54941 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Smarce1O54941 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Smarce1O54941 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smarce1O54941 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smarce1O54941 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarce1O54941 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smarce1O54941 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarce1O54941 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms