Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.01□□□□□ -0.17
Npc1O35604 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.01□□□□□ -0.17
Npc1O35604 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.01□□□□□ -0.17
Npc1O35604 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.01□□□□□ -0.17
Npc1O35604 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14□□□□□ -0.17
Npc1O35604 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Gm13015-201ENSMUST00000118674 204 ntBASIC14□□□□□ -0.17
Npc1O35604 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Mir7023-201ENSMUST00000185093 64 ntBASIC14□□□□□ -0.17
Npc1O35604 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 AC126408.1-201ENSMUST00000225184 523 ntBASIC14□□□□□ -0.17
Npc1O35604 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Npc1O35604 Gm21451-201ENSMUST00000111062 2775 ntBASIC14□□□□□ -0.17
Npc1O35604 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npc1O35604 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Npc1O35604 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Npc1O35604 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Gm8410-201ENSMUST00000117225 605 ntBASIC13.99□□□□□ -0.17
Npc1O35604 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.99□□□□□ -0.17
Npc1O35604 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Npc1O35604 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npc1O35604 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Npc1O35604 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Npc1O35604 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.98□□□□□ -0.17
Npc1O35604 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Npc1O35604 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.98□□□□□ -0.17
Npc1O35604 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Npc1O35604 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npc1O35604 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms