Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col15a1O35206 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col15a1O35206 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.18■□□□□ 0.5
Col15a1O35206 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.18■□□□□ 0.5
Col15a1O35206 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col15a1O35206 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.17■□□□□ 0.5
Col15a1O35206 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Col15a1O35206 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.17■□□□□ 0.5
Col15a1O35206 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.17■□□□□ 0.5
Col15a1O35206 Gm8598-201ENSMUST00000221184 836 ntBASIC18.17■□□□□ 0.5
Col15a1O35206 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.17■□□□□ 0.5
Col15a1O35206 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.17■□□□□ 0.5
Col15a1O35206 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.17■□□□□ 0.5
Col15a1O35206 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.17■□□□□ 0.5
Col15a1O35206 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Col15a1O35206 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col15a1O35206 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Col15a1O35206 Gm15198-201ENSMUST00000117283 177 ntBASIC18.17■□□□□ 0.5
Col15a1O35206 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC18.17■□□□□ 0.5
Col15a1O35206 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.17■□□□□ 0.5
Col15a1O35206 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col15a1O35206 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col15a1O35206 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.17■□□□□ 0.5
Col15a1O35206 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.16■□□□□ 0.5
Col15a1O35206 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col15a1O35206 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Mir1247-201ENSMUST00000116706 82 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Col15a1O35206 Gm44397-201ENSMUST00000195950 113 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.16■□□□□ 0.5
Col15a1O35206 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col15a1O35206 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.16■□□□□ 0.5
Col15a1O35206 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.16■□□□□ 0.5
Col15a1O35206 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.15■□□□□ 0.5
Col15a1O35206 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col15a1O35206 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col15a1O35206 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms