Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trove2O08848 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trove2O08848 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trove2O08848 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.75□□□□□ -0.05
Trove2O08848 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trove2O08848 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.75□□□□□ -0.05
Trove2O08848 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trove2O08848 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trove2O08848 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trove2O08848 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trove2O08848 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.73□□□□□ -0.05
Trove2O08848 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Gm11764-201ENSMUST00000120221 623 ntBASIC14.73□□□□□ -0.05
Trove2O08848 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.73□□□□□ -0.05
Trove2O08848 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.73□□□□□ -0.05
Trove2O08848 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.73□□□□□ -0.05
Trove2O08848 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.73□□□□□ -0.05
Trove2O08848 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.73□□□□□ -0.05
Trove2O08848 Gm18195-201ENSMUST00000207604 706 ntBASIC14.73□□□□□ -0.05
Trove2O08848 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Trove2O08848 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.73□□□□□ -0.05
Trove2O08848 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trove2O08848 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trove2O08848 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trove2O08848 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trove2O08848 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.72□□□□□ -0.05
Trove2O08848 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.72□□□□□ -0.05
Trove2O08848 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Trove2O08848 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Trove2O08848 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.72□□□□□ -0.05
Trove2O08848 AV026068-213ENSMUST00000223675 1171 ntBASIC14.72□□□□□ -0.05
Trove2O08848 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trove2O08848 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trove2O08848 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms