Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Tcof1O08784 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Gm5866-201ENSMUST00000177881 973 ntBASIC16.77■□□□□ 0.28
Tcof1O08784 Gm5745-201ENSMUST00000183748 313 ntBASIC16.77■□□□□ 0.28
Tcof1O08784 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tcof1O08784 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tcof1O08784 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcof1O08784 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Tcof1O08784 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Tcof1O08784 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tcof1O08784 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tcof1O08784 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tcof1O08784 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tcof1O08784 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tcof1O08784 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.76■□□□□ 0.27
Tcof1O08784 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.76■□□□□ 0.27
Tcof1O08784 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.76■□□□□ 0.27
Tcof1O08784 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.76■□□□□ 0.27
Tcof1O08784 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.76■□□□□ 0.27
Tcof1O08784 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Gm43703-201ENSMUST00000200523 763 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.76■□□□□ 0.27
Tcof1O08784 Gm46209-201ENSMUST00000217912 553 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Tcof1O08784 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcof1O08784 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.76■□□□□ 0.27
Tcof1O08784 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tcof1O08784 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tcof1O08784 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.75■□□□□ 0.27
Tcof1O08784 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Tcof1O08784 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.75■□□□□ 0.27
Tcof1O08784 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tcof1O08784 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tcof1O08784 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tcof1O08784 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.75■□□□□ 0.27
Tcof1O08784 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tcof1O08784 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Gm15487-201ENSMUST00000122373 465 ntBASIC16.74■□□□□ 0.27
Tcof1O08784 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Tcof1O08784 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tcof1O08784 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.74■□□□□ 0.27
Tcof1O08784 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.74■□□□□ 0.27
Tcof1O08784 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.74■□□□□ 0.27
Tcof1O08784 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcof1O08784 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms