Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.27□□□□□ -0.45
Casp6O08738 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.27□□□□□ -0.45
Casp6O08738 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.27□□□□□ -0.45
Casp6O08738 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.27□□□□□ -0.45
Casp6O08738 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.27□□□□□ -0.45
Casp6O08738 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Casp6O08738 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.27□□□□□ -0.45
Casp6O08738 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Casp6O08738 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.26□□□□□ -0.45
Casp6O08738 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Casp6O08738 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.26□□□□□ -0.45
Casp6O08738 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Casp6O08738 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Casp6O08738 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Casp6O08738 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Casp6O08738 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.25□□□□□ -0.45
Casp6O08738 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.25□□□□□ -0.45
Casp6O08738 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Casp6O08738 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Casp6O08738 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Gm4984-201ENSMUST00000115987 360 ntBASIC12.25□□□□□ -0.45
Casp6O08738 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.25□□□□□ -0.45
Casp6O08738 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.25□□□□□ -0.45
Casp6O08738 Gm12138-201ENSMUST00000122180 951 ntBASIC12.25□□□□□ -0.45
Casp6O08738 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.25□□□□□ -0.45
Casp6O08738 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.25□□□□□ -0.45
Casp6O08738 Gm4804-201ENSMUST00000182234 999 ntBASIC12.25□□□□□ -0.45
Casp6O08738 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.25□□□□□ -0.45
Casp6O08738 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.25□□□□□ -0.45
Casp6O08738 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.25□□□□□ -0.45
Casp6O08738 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.25□□□□□ -0.45
Casp6O08738 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 BC001981-202ENSMUST00000191393 1545 ntBASIC12.25□□□□□ -0.45
Casp6O08738 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Casp6O08738 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Casp6O08738 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Casp6O08738 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Casp6O08738 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Casp6O08738 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.24□□□□□ -0.45
Casp6O08738 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Casp6O08738 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Casp6O08738 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms