Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Mir1938-201ENSMUST00000158746 100 ntBASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Gm6091-201ENSMUST00000098307 165 ntBASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcf11G3X9Z4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm7561-201ENSMUST00000211203 886 ntBASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm18934-201ENSMUST00000216671 1044 ntBASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm15770-201ENSMUST00000117498 584 ntBASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcf11G3X9Z4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Gm24644-201ENSMUST00000157114 139 ntBASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Gm45784-201ENSMUST00000188360 142 ntBASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Gm5069-202ENSMUST00000192714 1011 ntBASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcf11G3X9Z4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Ankra2-208ENSMUST00000226100 1476 ntBASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Gm27486-201ENSMUST00000184923 80 ntBASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Gm44397-201ENSMUST00000195950 113 ntBASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcf11G3X9Z4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcf11G3X9Z4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms