Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm2451-201ENSMUST00000199447 999 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm10290-201ENSMUST00000200451 999 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm7399-201ENSMUST00000032395 858 ntBASIC17.2■□□□□ 0.34
NpcdF8VQB8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NpcdF8VQB8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm27847-201ENSMUST00000183711 107 ntBASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm27375-201ENSMUST00000183799 107 ntBASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm29127-201ENSMUST00000188304 517 ntBASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm2495-201ENSMUST00000191160 466 ntBASIC17.19■□□□□ 0.34
NpcdF8VQB8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm7287-201ENSMUST00000205267 602 ntBASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm8463-201ENSMUST00000208573 613 ntBASIC17.19■□□□□ 0.34
NpcdF8VQB8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NpcdF8VQB8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.18■□□□□ 0.34
NpcdF8VQB8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NpcdF8VQB8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NpcdF8VQB8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Gm15236-201ENSMUST00000117309 379 ntBASIC17.17■□□□□ 0.34
NpcdF8VQB8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.17■□□□□ 0.34
NpcdF8VQB8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NpcdF8VQB8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms