Protein–RNA interactions for Protein: F8VPU2

Farp1, FERM, ARHGEF and pleckstrin domain-containing protein 1, mousemouse

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Farp1F8VPU2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Farp1F8VPU2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Farp1F8VPU2 Gm18719-201ENSMUST00000196696 1413 ntBASIC15.24■□□□□ 0.03
Farp1F8VPU2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Farp1F8VPU2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Farp1F8VPU2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Farp1F8VPU2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Farp1F8VPU2 Gm37965-201ENSMUST00000195304 1362 ntBASIC15.24■□□□□ 0.03
Farp1F8VPU2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm15920-201ENSMUST00000118998 402 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm24158-201ENSMUST00000175263 71 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm43553-201ENSMUST00000200900 685 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm17917-201ENSMUST00000218561 953 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 AC132446.1-201ENSMUST00000222655 226 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.23■□□□□ 0.03
Farp1F8VPU2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Farp1F8VPU2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Farp1F8VPU2 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.22■□□□□ 0.03
Farp1F8VPU2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm10275-202ENSMUST00000168697 495 ntBASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm29107-201ENSMUST00000190910 347 ntBASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm42919-201ENSMUST00000197753 1284 ntBASIC15.22■□□□□ 0.03
Farp1F8VPU2 AC125539.1-202ENSMUST00000226449 670 ntBASIC15.22■□□□□ 0.03
Farp1F8VPU2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm10275-201ENSMUST00000092620 635 ntBASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Farp1F8VPU2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.22■□□□□ 0.03
Farp1F8VPU2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.21■□□□□ 0.03
Farp1F8VPU2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Gm10253-201ENSMUST00000194270 940 ntBASIC15.21■□□□□ 0.03
Farp1F8VPU2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.21■□□□□ 0.03
Farp1F8VPU2 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Farp1F8VPU2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms