Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.3■□□□□ 0.68
Zc3h13E9Q784 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h13E9Q784 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm13461-201ENSMUST00000120980 662 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 CT030182.1-201ENSMUST00000225935 533 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h13E9Q784 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Mir6979-201ENSMUST00000183927 56 ntBASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm12403-201ENSMUST00000121384 959 ntBASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gm4335-201ENSMUST00000182581 1004 ntBASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h13E9Q784 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Gm9347-201ENSMUST00000211473 1607 ntBASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Gm24447-201ENSMUST00000083977 338 ntBASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.27■□□□□ 0.68
Zc3h13E9Q784 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zc3h13E9Q784 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zc3h13E9Q784 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zc3h13E9Q784 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zc3h13E9Q784 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Gm20482-202ENSMUST00000174729 825 ntBASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Itm2b-204ENSMUST00000228637 783 ntBASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h13E9Q784 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms