Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Gm18307-201ENSMUST00000206864 949 ntBASIC17.14■□□□□ 0.33
Ube4aE9Q735 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube4aE9Q735 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.13■□□□□ 0.33
Ube4aE9Q735 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.13■□□□□ 0.33
Ube4aE9Q735 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.13■□□□□ 0.33
Ube4aE9Q735 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube4aE9Q735 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.12■□□□□ 0.33
Ube4aE9Q735 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ube4aE9Q735 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ube4aE9Q735 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.12■□□□□ 0.33
Ube4aE9Q735 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube4aE9Q735 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Gm13385-201ENSMUST00000121089 220 ntBASIC17.11■□□□□ 0.33
Ube4aE9Q735 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Gm5035-201ENSMUST00000215581 927 ntBASIC17.11■□□□□ 0.33
Ube4aE9Q735 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube4aE9Q735 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms