Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Gm7902-201ENSMUST00000198842 947 ntBASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a3E9PWQ3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Mospd4-201ENSMUST00000180618 576 ntBASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Gm43610-201ENSMUST00000199117 365 ntBASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a3E9PWQ3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm27552-201ENSMUST00000183351 62 ntBASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm27844-201ENSMUST00000183613 62 ntBASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a3E9PWQ3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Gm24548-201ENSMUST00000158650 108 ntBASIC14□□□□□ -0.17
Col6a3E9PWQ3 Olfr286-202ENSMUST00000205305 969 ntBASIC14□□□□□ -0.17
Col6a3E9PWQ3 Itm2b-204ENSMUST00000228637 783 ntBASIC14□□□□□ -0.17
Col6a3E9PWQ3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14□□□□□ -0.17
Col6a3E9PWQ3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Col6a3E9PWQ3 AC156501.1-201ENSMUST00000228219 270 ntBASIC14□□□□□ -0.17
Col6a3E9PWQ3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14□□□□□ -0.17
Col6a3E9PWQ3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms