Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Gm10275-202ENSMUST00000168697 495 ntBASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Gm7461-201ENSMUST00000058918 827 ntBASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Gm10275-201ENSMUST00000092620 635 ntBASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc112A0AUP1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc112A0AUP1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc112A0AUP1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccdc112A0AUP1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms