Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lnp1A0A1B0GSK3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm11543-201ENSMUST00000120758 370 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm13365-201ENSMUST00000121188 973 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lnp1A0A1B0GSK3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm18057-201ENSMUST00000208220 503 ntBASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lnp1A0A1B0GSK3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.92□□□□□ -0.5
Lnp1A0A1B0GSK3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Lnp1A0A1B0GSK3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lnp1A0A1B0GSK3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lnp1A0A1B0GSK3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lnp1A0A1B0GSK3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.92□□□□□ -0.5
Lnp1A0A1B0GSK3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms