Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc194A0A140LIT1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc194A0A140LIT1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc194A0A140LIT1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc194A0A140LIT1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc194A0A140LIT1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc194A0A140LIT1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc194A0A140LIT1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc194A0A140LIT1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc194A0A140LIT1 Psmb5-202ENSMUST00000227257 622 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms