Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm27525-201ENSMUST00000184465 107 ntBASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm8000-201ENSMUST00000188378 592 ntBASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm5264-201ENSMUST00000190584 848 ntBASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm45098-201ENSMUST00000207179 657 ntBASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm9182-201ENSMUST00000217829 639 ntBASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rpph1-201ENSMUST00000175096 319 ntBASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms