Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm11764-201ENSMUST00000120221 623 ntBASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm6089-201ENSMUST00000197666 938 ntBASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6d-5A0A075B6B9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm13418-201ENSMUST00000119097 944 ntBASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6d-5A0A075B6B9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms