Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CcsQ9WU84 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.19□□□□□ -0.62
CcsQ9WU84 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CcsQ9WU84 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CcsQ9WU84 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.19□□□□□ -0.62
CcsQ9WU84 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.19□□□□□ -0.62
CcsQ9WU84 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcsQ9WU84 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44357-201ENSMUST00000195897 142 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm19658-201ENSMUST00000196231 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44367-201ENSMUST00000196836 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44350-201ENSMUST00000197197 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44390-201ENSMUST00000197533 144 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44313-201ENSMUST00000198018 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44486-201ENSMUST00000198508 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44314-201ENSMUST00000199263 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44394-201ENSMUST00000199558 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44484-201ENSMUST00000199873 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44466-201ENSMUST00000200264 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm44359-201ENSMUST00000200671 138 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm6376-201ENSMUST00000209407 580 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.18□□□□□ -0.62
CcsQ9WU84 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CcsQ9WU84 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.18□□□□□ -0.62
CcsQ9WU84 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcsQ9WU84 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Gm12008-201ENSMUST00000117791 755 ntBASIC11.17□□□□□ -0.62
CcsQ9WU84 Gm7862-201ENSMUST00000121461 292 ntBASIC11.17□□□□□ -0.62
CcsQ9WU84 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcsQ9WU84 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Gm44771-201ENSMUST00000206975 626 ntBASIC11.17□□□□□ -0.62
CcsQ9WU84 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.17□□□□□ -0.62
CcsQ9WU84 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.17□□□□□ -0.62
CcsQ9WU84 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms