Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.82■□□□□ 0.12
Prpf40aQ9R1C7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm11745-201ENSMUST00000121669 448 ntBASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm19891-201ENSMUST00000189771 303 ntBASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Gm9182-201ENSMUST00000217829 639 ntBASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40aQ9R1C7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Gm27920-201ENSMUST00000183953 96 ntBASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40aQ9R1C7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Olfr286-202ENSMUST00000205305 969 ntBASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Gm45098-201ENSMUST00000207179 657 ntBASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40aQ9R1C7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40aQ9R1C7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Prpf40aQ9R1C7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40aQ9R1C7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40aQ9R1C7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40aQ9R1C7 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms