Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.77■□□□□ 0.27
Scn11aQ9R053 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn11aQ9R053 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Scn11aQ9R053 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 Gm26461-201ENSMUST00000175064 290 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 Gm24196-201ENSMUST00000179161 110 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 Gm29608-201ENSMUST00000190444 463 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.76■□□□□ 0.27
Scn11aQ9R053 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn11aQ9R053 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Gm11803-201ENSMUST00000119966 444 ntBASIC16.75■□□□□ 0.27
Scn11aQ9R053 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Gm24420-201ENSMUST00000176676 59 ntBASIC16.75■□□□□ 0.27
Scn11aQ9R053 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn11aQ9R053 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Gm15429-201ENSMUST00000151268 798 ntBASIC16.74■□□□□ 0.27
Scn11aQ9R053 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.74■□□□□ 0.27
Scn11aQ9R053 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.74■□□□□ 0.27
Scn11aQ9R053 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.74■□□□□ 0.27
Scn11aQ9R053 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.74■□□□□ 0.27
Scn11aQ9R053 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Gm38241-201ENSMUST00000192641 898 ntBASIC16.74■□□□□ 0.27
Scn11aQ9R053 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn11aQ9R053 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gm23931-201ENSMUST00000103842 109 ntBASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gm14723-201ENSMUST00000118686 215 ntBASIC16.73■□□□□ 0.27
Scn11aQ9R053 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.73■□□□□ 0.27
Scn11aQ9R053 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn11aQ9R053 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms