Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcf1Q9QZM3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Gm9824-201ENSMUST00000178707 561 ntBASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clcf1Q9QZM3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm27430-201ENSMUST00000184585 107 ntBASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm44333-201ENSMUST00000197168 107 ntBASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm5779-201ENSMUST00000218467 910 ntBASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clcf1Q9QZM3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clcf1Q9QZM3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms