Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tubb3Q9ERD7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Gm15920-201ENSMUST00000118998 402 ntBASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Gm10576-201ENSMUST00000191927 825 ntBASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Gm20553-201ENSMUST00000204205 844 ntBASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb3Q9ERD7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Gm18889-201ENSMUST00000174284 929 ntBASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb3Q9ERD7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Mir6990-201ENSMUST00000183724 91 ntBASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Gm5312-201ENSMUST00000203728 547 ntBASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tubb3Q9ERD7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms