Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm15957-201ENSMUST00000118893 974 ntBASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm43822-201ENSMUST00000200285 476 ntBASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Prob1-201ENSMUST00000097619 3021 ntBASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Gm12882-201ENSMUST00000121696 517 ntBASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Gm24526-201ENSMUST00000082921 158 ntBASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-4Q9EQM3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm15236-201ENSMUST00000117309 379 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm7584-201ENSMUST00000175829 940 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-4Q9EQM3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms