Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC19.61■□□□□ 0.73
Cpsf1Q9EPU4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Gm24420-201ENSMUST00000176676 59 ntBASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC19.6■□□□□ 0.73
Cpsf1Q9EPU4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 AC166997.1-201ENSMUST00000225122 572 ntBASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Gm12091-201ENSMUST00000146791 830 ntBASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
Cpsf1Q9EPU4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Gm12020-201ENSMUST00000119030 2042 ntBASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cpsf1Q9EPU4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Mir7654-201ENSMUST00000185082 70 ntBASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf1Q9EPU4 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cpsf1Q9EPU4 Gm12341-201ENSMUST00000119724 503 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms