Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Gm44454-201ENSMUST00000198541 138 ntBASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.57□□□□□ -0.08
Sf3a3Q9D554 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3a3Q9D554 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Gm11950-201ENSMUST00000121615 838 ntBASIC14.56□□□□□ -0.08
Sf3a3Q9D554 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.56□□□□□ -0.08
Sf3a3Q9D554 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3a3Q9D554 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3a3Q9D554 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3a3Q9D554 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms