Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm11779-201ENSMUST00000118541 368 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm27525-201ENSMUST00000184465 107 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm37230-201ENSMUST00000194491 818 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm45747-201ENSMUST00000212203 999 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Thumpd2Q9CZB3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Gm5177-201ENSMUST00000183092 997 ntBASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Thap2-203ENSMUST00000218989 527 ntBASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Thumpd2Q9CZB3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.05■□□□□ 0
Thumpd2Q9CZB3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd2Q9CZB3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Gm16198-201ENSMUST00000118766 670 ntBASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Mir3113-201ENSMUST00000175478 76 ntBASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Gm45098-201ENSMUST00000207179 657 ntBASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Thumpd2Q9CZB3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms