Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim13Q9CYB0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Gm9682-201ENSMUST00000197505 556 ntBASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim13Q9CYB0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Gm37153-201ENSMUST00000193637 231 ntBASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim13Q9CYB0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim13Q9CYB0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim13Q9CYB0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim13Q9CYB0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms