Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pfdn1Q9CWM4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Gm26571-201ENSMUST00000181399 666 ntBASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pfdn1Q9CWM4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Gm14722-201ENSMUST00000118943 689 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn1Q9CWM4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms