Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldnd1Q9CQX5 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Gm38671-201ENSMUST00000200573 130 ntBASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cldnd1Q9CQX5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Gm5187-201ENSMUST00000117317 991 ntBASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Gm12384-201ENSMUST00000119228 919 ntBASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Gm37714-201ENSMUST00000194742 342 ntBASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cldnd1Q9CQX5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cldnd1Q9CQX5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.58□□□□□ -0.07
Cldnd1Q9CQX5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm15376-201ENSMUST00000122258 783 ntBASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cldnd1Q9CQX5 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms