Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm3344-201ENSMUST00000169610 603 ntBASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm43553-201ENSMUST00000200900 685 ntBASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Gm38225-201ENSMUST00000194001 393 ntBASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Gm43435-201ENSMUST00000199996 1438 ntBASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retreg3Q9CQV4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm13183-201ENSMUST00000118615 789 ntBASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm27430-201ENSMUST00000184585 107 ntBASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm44333-201ENSMUST00000197168 107 ntBASIC14.53□□□□□ -0.08
Retreg3Q9CQV4 Gm6649-201ENSMUST00000199743 1165 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms