Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Matn2-206ENSMUST00000228570 2798 ntBASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ska1Q9CPV1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gm18246-201ENSMUST00000221023 728 ntBASIC13.57□□□□□ -0.24
Ska1Q9CPV1 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ska1Q9CPV1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ska1Q9CPV1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms