Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Gm13464-201ENSMUST00000119418 935 ntBASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.97□□□□□ -0.33
Krt88Q9CPR6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt88Q9CPR6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gm27357-201ENSMUST00000183754 135 ntBASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt88Q9CPR6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt88Q9CPR6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Acot6-202ENSMUST00000222921 3622 ntBASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt88Q9CPR6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms