Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4Q99P72 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4Q99P72 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4Q99P72 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Gm15483-201ENSMUST00000120338 456 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Gm25318-201ENSMUST00000122554 314 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4Q99P72 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.51■□□□□ 0.55
Rtn4Q99P72 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.5■□□□□ 0.55
Rtn4Q99P72 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC18.5■□□□□ 0.55
Rtn4Q99P72 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rtn4Q99P72 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gm29245-201ENSMUST00000187332 1416 ntBASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gm43435-201ENSMUST00000199996 1438 ntBASIC18.49■□□□□ 0.55
Rtn4Q99P72 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gm37641-201ENSMUST00000193837 239 ntBASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gm10253-201ENSMUST00000194270 940 ntBASIC18.49■□□□□ 0.55
Rtn4Q99P72 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Gm10652-201ENSMUST00000199790 2622 ntBASIC18.49■□□□□ 0.55
Rtn4Q99P72 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4Q99P72 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms