Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trem2Q99NH8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.62□□□□□ -0.07
Trem2Q99NH8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trem2Q99NH8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Gm25287-201ENSMUST00000103846 110 ntBASIC14.61□□□□□ -0.07
Trem2Q99NH8 Gm22918-201ENSMUST00000103855 110 ntBASIC14.61□□□□□ -0.07
Trem2Q99NH8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Gm18889-201ENSMUST00000174284 929 ntBASIC14.61□□□□□ -0.07
Trem2Q99NH8 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.61□□□□□ -0.07
Trem2Q99NH8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trem2Q99NH8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.6□□□□□ -0.07
Trem2Q99NH8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Gm4995-201ENSMUST00000117247 432 ntBASIC14.6□□□□□ -0.07
Trem2Q99NH8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.6□□□□□ -0.07
Trem2Q99NH8 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.6□□□□□ -0.07
Trem2Q99NH8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trem2Q99NH8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.59□□□□□ -0.07
Trem2Q99NH8 Gm43514-201ENSMUST00000198852 424 ntBASIC14.59□□□□□ -0.07
Trem2Q99NH8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.59□□□□□ -0.07
Trem2Q99NH8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trem2Q99NH8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms