Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Gm16198-201ENSMUST00000118766 670 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Gm17968-201ENSMUST00000194902 784 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Gm10154-201ENSMUST00000084445 354 ntBASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rnf111Q99ML9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Gm2272-201ENSMUST00000194903 582 ntBASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rnf111Q99ML9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Gm11779-201ENSMUST00000118541 368 ntBASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.91□□□□□ -0.18
Rnf111Q99ML9 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rnf111Q99ML9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms