Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Syt7-205ENSMUST00000224135 1557 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm27631-201ENSMUST00000184163 466 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcc1Q99LI2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Gm7730-201ENSMUST00000212486 454 ntBASIC14.18□□□□□ -0.14
Clcc1Q99LI2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Dupd1-202ENSMUST00000224735 548 ntBASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcc1Q99LI2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.17□□□□□ -0.14
Clcc1Q99LI2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcc1Q99LI2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms