Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.35□□□□□ -0.11
Cstf1Q99LC2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.35□□□□□ -0.11
Cstf1Q99LC2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Gm5356-201ENSMUST00000093326 615 ntBASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cstf1Q99LC2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Cstf1Q99LC2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.33□□□□□ -0.11
Cstf1Q99LC2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cstf1Q99LC2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cstf1Q99LC2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cstf1Q99LC2 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Gm12585-201ENSMUST00000117307 290 ntBASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Gm12341-201ENSMUST00000119724 503 ntBASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Gm5354-201ENSMUST00000182417 973 ntBASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Cstf1Q99LC2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cstf1Q99LC2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms