Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Carlr-201ENSMUST00000181515 2574 ntBASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gm5566-201ENSMUST00000116118 459 ntBASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gm25144-201ENSMUST00000179561 110 ntBASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gm25352-201ENSMUST00000179815 110 ntBASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb2Q91Y00 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb2Q91Y00 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb2Q91Y00 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms