Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Thap2-203ENSMUST00000218989 527 ntBASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb4Q91XZ6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhb4Q91XZ6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Gm1401-201ENSMUST00000122048 772 ntBASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Gm27301-201ENSMUST00000184012 127 ntBASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb4Q91XZ6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb4Q91XZ6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb4Q91XZ6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms