Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.4■□□□□ 0.22
Trex1Q91XB0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Gm12341-201ENSMUST00000119724 503 ntBASIC16.4■□□□□ 0.22
Trex1Q91XB0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.4■□□□□ 0.22
Trex1Q91XB0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.4■□□□□ 0.22
Trex1Q91XB0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.4■□□□□ 0.22
Trex1Q91XB0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.4■□□□□ 0.22
Trex1Q91XB0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trex1Q91XB0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.39■□□□□ 0.21
Trex1Q91XB0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Gm5279-201ENSMUST00000199575 745 ntBASIC16.39■□□□□ 0.21
Trex1Q91XB0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.39■□□□□ 0.21
Trex1Q91XB0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trex1Q91XB0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm15678-201ENSMUST00000117573 960 ntBASIC16.38■□□□□ 0.21
Trex1Q91XB0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm8602-201ENSMUST00000184045 607 ntBASIC16.38■□□□□ 0.21
Trex1Q91XB0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm17795-201ENSMUST00000214505 757 ntBASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.38■□□□□ 0.21
Trex1Q91XB0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trex1Q91XB0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trex1Q91XB0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms