Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Gm15427-201ENSMUST00000117288 531 ntBASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Gm5479-201ENSMUST00000160578 435 ntBASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H1fooQ8VIK3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Rpph1-201ENSMUST00000175096 319 ntBASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.03□□□□□ -0.48
H1fooQ8VIK3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H1fooQ8VIK3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms