Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Gm44335-201ENSMUST00000196879 141 ntBASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Gm43438-201ENSMUST00000198133 379 ntBASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Gm44297-201ENSMUST00000198304 141 ntBASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Gm44346-201ENSMUST00000198851 141 ntBASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4aQ8VEJ9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4aQ8VEJ9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4aQ8VEJ9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Gm27301-201ENSMUST00000184012 127 ntBASIC13.95□□□□□ -0.18
Vps4aQ8VEJ9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms