Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.27□□□□□ -0.12
Retreg1dQ8VE91 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retreg1dQ8VE91 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gm6415-201ENSMUST00000118488 348 ntBASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retreg1dQ8VE91 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retreg1dQ8VE91 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms